Preheat the oven to 450°F. Grease a large baking sheet or pizza pan with olive oil.
In a small bowl, combine 1 Tbsp olive oil, the honey, balsamic vinegar, shallot, garlic, thyme, and a pinch each of red pepper flakes, salt, and pepper.
In a separate bowl, toss together the remaining 1 Tbsp olive oil, the Brussels sprouts, Parmesan or Manchego, and a pinch of salt and pepper.
On a lightly floured surface, push/roll the dough out until it is pretty thin (about a 10-12 inch circle). Transfer the dough to the prepared baking sheet.
Spread the dough with the olive oil/balsamic herb mix. Add the fontina or Havarti cheese, then layer the Brussels sprouts over the cheese. Bake for 10-15 minutes or until the crust is golden and the cheese has melted.
Meanwhile, cook the bacon until crisp. Top the pizza with the crispy bacon and additional freshly shaved Parmesan. Slice and enjoy!